Information for 3-CATCWGCTGT (Motif 2)

A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T
Reverse Opposite:
G T C A A G T C G T C A C A T G T A G C C G A T A T C G C T G A A C G T A T C G
p-value:1e-23
log p-value:-5.485e+01
Information Content per bp:1.657
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif13.47%
Number of Background Sequences with motif1790.6
Percentage of Background Sequences with motif4.41%
Average Position of motif in Targets45.7 +/- 23.9bp
Average Position of motif in Background49.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP4/MA0691.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CATCWGCTGT-
-ATCAGCTGTT
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T A C G T
A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CATCWGCTGT
NAHCAGCTGD
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CATCWGCTGT
CAGCAGCTGN
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Tcf21/MA0832.1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CATCWGCTGT---
NCAACAGCTGTTGC
 A C G T A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T A C G T A C G T A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CATCWGCTGT-
NNGCAGCTGTT
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T A C G T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CATCWGCTGT
BAACAGCTGT
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CATCWGCTGT-
---CAGCTGTT
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T A C G T
A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CATCWGCTGT-
NNGCAGCTGTC
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CATCWGCTGT-
-ACCACCTGTT
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T A C G T
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CATCWGCTGT
-ANCAGCTG-
 A T G C G T C A G A C T A T G C C G T A A T C G G T A C C A G T T A C G C A G T
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T