Information for 7-TTCCCGGAAG (Motif 6)

G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G
Reverse Opposite:
A T G C A G C T A C G T G T A C G A T C T A C G C T A G A T C G T C G A C T G A
p-value:1e-15
log p-value:-3.670e+01
Information Content per bp:1.658
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1081.6
Percentage of Background Sequences with motif2.33%
Average Position of motif in Targets49.7 +/- 26.0bp
Average Position of motif in Background49.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TTCCCGGAAG
TTCCNGGAAG
 G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---TTCCCGGAAG-
NNCTTCCNGGAAGN
 A C G T A C G T A C G T G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--TTCCCGGAAG
NTTTCCNGGAAA
 A C G T A C G T G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCGGAAG
TTTCCTGGAAA
 A C G T G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCGGAAG
TTTCCCAGAAN
 A C G T G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----TTCCCGGAAG
NNNTTTCCTGGAAA
 A C G T A C G T A C G T A C G T G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---TTCCCGGAAG-
NATTTCCNGGAAAT
 A C G T A C G T A C G T G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TTCCCGGAAG
ATTTCCAAGAA-
 A C G T A C G T G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.80
Offset:3
Orientation:forward strand
Alignment:TTCCCGGAAG----
---CCGGAAGTGGC
 G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCGGAAG----
TTTCCTGGAAAGNNN
 A C G T G A C T A G C T T A G C G A T C A T G C C T A G C A T G T G C A T C G A T A C G A C G T A C G T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A