Information for 9-GAGGSTGCTGTCTCCT (Motif 12)

A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T
Reverse Opposite:
C G T A A C T G A T C G T C G A C T A G C G T A A G T C C G T A A T C G A G T C G C T A A T G C A T G C A G T C A C G T A T G C
p-value:1e-10
log p-value:-2.403e+01
Information Content per bp:1.794
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 22.3bp
Average Position of motif in Background62.3 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGGSTGCTGTCTCCT
AGATGCTRCTRCCHT--
 A C G T A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGGSTGCTGTCTCCT
-----TGCTGACTCA-
 A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GAGGSTGCTGTCTCCT
-------CTGTCTGG-
 A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGGSTGCTGTCTCCT-
-GCGGAGGTGTCGCCTC
 A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGGSTGCTGTCTCCT
NNVDGGGYGGGGCYN---
 A C G T A C G T A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GAGGSTGCTGTCTCCT--
------SCTGTCARCACC
 A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGGSTGCTGTCTCCT-
--GTCWGCTGTYYCTCT
 A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T A C G T
A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GAGGSTGCTGTCTCCT
------GCTGTG----
 A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAGGSTGCTGTCTCCT
----CAGCTGTTTCCT
 A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T
A C G T A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGGSTGCTGTCTCCT
--TGCAGCTGTCCCT-
 A T C G T G C A A C T G A T C G A T C G C A G T A C T G A T G C C G A T A C T G A C G T A G T C A C G T A T G C A G T C G A C T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T