Information for 12-NAGGGRAWTCCCC (Motif 10)

A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C
Reverse Opposite:
C T A G A C T G A C T G C T A G T G C A C G T A A C G T A G C T A G T C A G T C A G T C G A C T T G A C
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.711
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.2 +/- 25.9bp
Average Position of motif in Background48.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB2/MA0778.1/Jaspar

Match Rank:1
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NAGGGRAWTCCCC-
-AGGGGATTCCCCT
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:NAGGGRAWTCCCC-
--GGGAAATCCCCN
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.90
Offset:1
Orientation:forward strand
Alignment:NAGGGRAWTCCCC-
-AGGGGAATCCCCT
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:NAGGGRAWTCCCC-
--GGGGATTCCCCC
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:NAGGGRAWTCCCC
---GGAAATCCCC
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:NAGGGRAWTCCCC
---GGAAATTCCC
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:NAGGGRAWTCCCC
---GGAAANCCCC
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:NAGGGRAWTCCCC
--GGGAATTTCC-
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:NAGGGRAWTCCCC
-TGGGGA------
 A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----NAGGGRAWTCCCC
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T A C T G C T G A C T A G A C T G A C T G C T G A G T C A G C A T A C G T A G T C A G T C G T A C A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T