Information for 7-GACAGACGCC (Motif 22)

C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C
Reverse Opposite:
C A T G T A C G G A T C A C T G C A G T A T G C C A G T A C T G A G C T G T A C
p-value:1e-4
log p-value:-1.055e+01
Information Content per bp:1.691
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.67%
Number of Background Sequences with motif2453.8
Percentage of Background Sequences with motif5.17%
Average Position of motif in Targets48.0 +/- 26.7bp
Average Position of motif in Background49.7 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GACAGACGCC--
AGCAACAGCCGCACC
 A C G T A C G T A C G T C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GACAGACGCC-
-CCAGACRSVB
 C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GACAGACGCC
CACAGN----
 C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GACAGACGCC
-CCAGACAG-
 C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACAGACGCC
TTGACAGC----
 A C G T A C G T C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GACAGACGCC
AGGTGHCAGACA--
 A C G T A C G T A C G T A C G T C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACAGACGCC-
GGACACACCCCC
 A C G T C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C A C G T
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACAGACGCC
TTGACAG-----
 A C G T A C G T C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGACGCC-
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T A C G T C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACAGACGCC
TTGACAGG----
 A C G T A C G T C A T G T C G A A G T C G T C A T A C G G T C A T G A C C T A G A T G C G T A C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T