Information for 14-GCTAAATTTGCCA (Motif 20)

C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A T G C C G T A C G T A C G T A A C G T A C G T C G A T C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.131e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif17.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.8 +/- 25.9bp
Average Position of motif in Background49.9 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT5/MA0606.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCTAAATTTGCCA--
-----ATTTTCCATT
 C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTAAATTTGCCA
ACTACAATTCCC-
 C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTAAATTTGCCA------
AACTACAATTCCCAGAATGC
 A C G T C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCTAAATTTGCCA--
-----ATTTTCCATT
 C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GCTAAATTTGCCA--
-------TTGCCAAG
 C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCTAAATTTGCCA
------TTTTCCA
 C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTAAATTTGCCA--
-----HTTTCCCASG
 C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTAAATTTGCCA------
RACTACAACTCCCAGVAKGC
 A C G T C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTAAATTTGCCA----
--NNAATTAGTCACGGT
 C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTAAATTTGCCA--
-----ATTTTCCATT
 C T A G A G T C A C G T C G T A G T C A C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T