Information for 1-GAAAYWGWKACTC (Motif 2)

A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A A C T G A C G T G T A C C G T A A G T C C G A T C T A G A C G T A C G T A C G T A G T C
p-value:1e-13
log p-value:-3.115e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.8 +/- 23.5bp
Average Position of motif in Background40.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GAAAYWGWKACTC
GAAACTGAAACT-
 A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAAAYWGWKACTC
TCGAAACCGAAACT-
 A C G T A C G T A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GAAAYWGWKACTC--
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAAAYWGWKACTC
GAAAMTGAAACT-
 A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAAAYWGWKACTC-
GGAAANTGAAACTNA
 A C G T A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAAAYWGWKACTC
GAAAGTGAAAGT-
 A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAAAYWGWKACTC
GRAASTGAAAST-
 A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAAAYWGWKACTC
AACGAAACCGAAACT-
 A C G T A C G T A C G T A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAAYWGWKACTC
GAAASYGAAASY-
 A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAAYWGWKACTC
ACGAAAGCGAAAGT-
 A C G T A C G T A C T G G T C A C G T A C G T A A G T C C G T A A C T G C G A T A C T G C G T A A G T C A G C T A G T C
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T