Motif 11

Information for 6-GCGCCGCCGCGCT (Motif 11)

Reverse Opposite:

p-value:	1e-10
log p-value:	-2.508e+01
Information Content per bp:	1.889
Number of Target Sequences with motif	8.0
Percentage of Target Sequences with motif	1.01%
Number of Background Sequences with motif	10.3
Percentage of Background Sequences with motif	0.02%
Average Position of motif in Targets	52.0 +/- 21.3bp
Average Position of motif in Background	47.8 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)	-1.6
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:	1
Score:	0.66
Offset:	-1
Orientation:	forward strand
Alignment:	-GCGCCGCCGCGCT GGCCCCGCCCCC--

PB0010.1_Egr1_1/Jaspar

Match Rank:	2
Score:	0.63
Offset:	-1
Orientation:	forward strand
Alignment:	-GCGCCGCCGCGCT TCCGCCCCCGCATT

PB0164.1_Smad3_2/Jaspar

Match Rank:	3
Score:	0.62
Offset:	-3
Orientation:	forward strand
Alignment:	---GCGCCGCCGCGCT- TACGCCCCGCCACTCTG

NRF1/MA0506.1/Jaspar

Match Rank:	4
Score:	0.62
Offset:	-1
Orientation:	reverse strand
Alignment:	-GCGCCGCCGCGCT TGCGCAGGCGC---

SP1/MA0079.3/Jaspar

Match Rank:	5
Score:	0.58
Offset:	0
Orientation:	forward strand
Alignment:	GCGCCGCCGCGCT GCCCCGCCCCC--

SP2/MA0516.1/Jaspar

Match Rank:	6
Score:	0.58
Offset:	0
Orientation:	forward strand
Alignment:	GCGCCGCCGCGCT-- GCCCCGCCCCCTCCC

EGR3/MA0732.1/Jaspar

Match Rank:	7
Score:	0.58
Offset:	-2
Orientation:	forward strand
Alignment:	--GCGCCGCCGCGCT CTACGCCCACGCACT

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	8
Score:	0.57
Offset:	0
Orientation:	reverse strand
Alignment:	GCGCCGCCGCGCT GCTCCGCCCMCY-

POL003.1_GC-box/Jaspar

Match Rank:	9
Score:	0.57
Offset:	-2
Orientation:	reverse strand
Alignment:	--GCGCCGCCGCGCT NAGCCCCGCCCCCN-

NHLH1/MA0048.2/Jaspar

Match Rank:	10
Score:	0.56
Offset:	1
Orientation:	reverse strand
Alignment:	GCGCCGCCGCGCT -CGCAGCTGCG--