Information for 5-AAAGGGAAAC (Motif 9)

C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C
Reverse Opposite:
C T A G A G C T A C G T A G C T A G T C G A T C A G T C A C G T G C A T A C G T
p-value:1e-13
log p-value:-3.134e+01
Information Content per bp:1.833
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif330.6
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets49.3 +/- 24.7bp
Average Position of motif in Background49.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGAAAC--
GAGAACCGAAACTG
 A C G T A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGGAAAC-
GAAAMTGAAACT
 A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGGAAAC-
GAAACTGAAACT
 A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGAAAC-
GAAASYGAAASY
 A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGAAAC-
GAAAGTGAAAGT
 A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGAAAC------
GGAAAGCGAAACCAAAAC
 A C G T A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGGAAAC---
GGAAANTGAAACTNA
 A C G T A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------AAAGGGAAAC-----
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAAGGGAAAC-
ACGAAAGCGAAAGT
 A C G T A C G T A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGAAAC-
GRAASTGAAAST
 A C G T C G T A C G T A G T C A T C A G C T A G C T A G C T G A G T C A C T G A A G T C A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T