Information for 8-AGTTGCTATT (Motif 12)

G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T
Reverse Opposite:
G C T A G T C A A G C T G T C A C A T G G A T C G T C A C T G A G T A C C G A T
p-value:1e-12
log p-value:-2.837e+01
Information Content per bp:1.690
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.48%
Number of Background Sequences with motif980.0
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets48.0 +/- 28.1bp
Average Position of motif in Background48.1 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGTTGCTATT-
CTGTTGCTAGGS
 A C G T G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGCTATT---
NCCGTTGCTANGNGN
 A C G T A C G T G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGCTATT---
TNAGTTTCGATTTTN
 A C G T A C G T G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGCTATT---
NNCGTTGCTATGGNN
 A C G T A C G T G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGTTGCTATT--
AGTTTCAKTTTC
 G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGTTGCTATT---
CAGTTTCGNTTCTN
 A C G T G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGTTGCTATT---
TCAGTTTCATTTTCC
 A C G T A C G T G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AGTTGCTATT-------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGCTATT---
NCNTTTGTTATTTNN
 A C G T A C G T G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTTGCTATT--
AGTTTCAGTTTC
 G C T A C A T G G A C T A C G T C T A G G T A C C A G T C T G A C A G T C G A T A C G T A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C