Information for 7-GCGCCCTCTA (Motif 9)

A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A C T A G G T C A C T A G A T C G A C T G A G T C C T A G A G T C
p-value:1e-10
log p-value:-2.405e+01
Information Content per bp:1.890
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif34.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.8 +/- 30.3bp
Average Position of motif in Background47.1 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCGCCCTCTA-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCCTCTA
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCCTCTA
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCCTCTA-------
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCTCTA
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCTCTA-------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCGCCCTCTA---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCTCTA
AGCGCGCC-----
 A C G T A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCCTCTA------
NTCNTCCCCTATNNGNN
 A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCTCTA
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C T G A G T C A T G C A G T C A C G T A G T C A C G T C G T A
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A