Information for 1-NCCACGTGGNNSS (Motif 1)

A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
Reverse Opposite:
T A C G T A C G T A C G T A C G T A G C A G T C C G T A A G T C A C T G A C G T A C T G A T C G T A G C
p-value:1e-108
log p-value:-2.494e+02
Information Content per bp:1.643
Number of Target Sequences with motif248.0
Percentage of Target Sequences with motif27.04%
Number of Background Sequences with motif2014.5
Percentage of Background Sequences with motif4.91%
Average Position of motif in Targets53.6 +/- 22.8bp
Average Position of motif in Background49.8 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-NCCACGTGGNNSS
NNCCACGTGG----
 A C G T A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NCCACGTGGNNSS
-CCACGTGGNN--
 A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--NCCACGTGGNNSS
NNACCACGTGGT---
 A C G T A C G T A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NCCACGTGGNNSS
GCCACGTG-----
 A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:NCCACGTGGNNSS
NCCACGTG-----
 A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:NCCACGTGGNNSS
--CACGTGBN---
 A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:NCCACGTGGNNSS
NNCACGTGGT---
 A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.93
Offset:0
Orientation:forward strand
Alignment:NCCACGTGGNNSS
GGCACGTGTC---
 A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.93
Offset:0
Orientation:forward strand
Alignment:NCCACGTGGNNSS
GNCACGTG-----
 A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:NCCACGTGGNNSS
NGCACGTGNT---
 A T C G T A G C A G T C C G T A A G T C C T A G A C G T A C T G A T C G A T G C A T G C A T G C A T G C
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T A C G T A C G T