Information for 6-AAAATTTCAT (Motif 6)

C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T
Reverse Opposite:
G C T A C G A T T A C G C G T A T C G A C T G A G C A T A C G T A G C T A G C T
p-value:1e-16
log p-value:-3.690e+01
Information Content per bp:1.717
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.17%
Number of Background Sequences with motif151.5
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets46.8 +/- 31.0bp
Average Position of motif in Background48.4 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAAATTTCAT----
TNGAATTTCATTNAN
 A C G T C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAATTTCAT--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AAAATTTCAT
----TTTAAT
 C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAATTTCAT------
NTNAATTTTATTGNATT
 A C G T C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AAAATTTCAT---
---ATTTCCTGTN
 C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAATTTCAT------
NNANTTTTATTGGNNN
 C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAAATTTCAT------
TNAATTTTATTACCTN
 C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AAAATTTCAT-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAATTTCAT------
-NNATNTGATANNNNN
 C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAAATTTCAT------
ANTAATTTTATGGCCGN
 A C G T C T G A T C G A G T C A C G T A A G C T A G C T A C G T A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T