Information for 10-ATTTCTRRACAKC (Motif 4)

C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C
Reverse Opposite:
C T A G G T C A C G A T A C T G A G C T G A T C G A C T C G T A A C T G C G T A C T G A G T C A C G A T
p-value:1e-18
log p-value:-4.356e+01
Information Content per bp:1.709
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.5 +/- 19.8bp
Average Position of motif in Background55.8 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATTTCTRRACAKC
-CGTCTAGACA--
 C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATTTCTRRACAKC-
CTTATCTCHMCATCT
 A C G T C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C A C G T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATTTCTRRACAKC-----
-TCNCTTTACAGCGNNNT
 C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATTTCTRRACAKC-----
-TCNNTTTACAGCGNNNT
 C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATTTCTRRACAKC-----
-TCNNTTTACAGCGNNNT
 C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

BCL6B/MA0731.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATTTCTRRACAKC-
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATTTCTRRACAKC-
TTTCCTAGAAAGCA
 C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATTTCTRRACAKC
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATTTCTRRACAKC
NTTTCTNAGAAA-
 C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATTTCTRRACAKC---
ATATCAAAACAAAACA
 C G T A A C G T A G C T A C G T G T A C C G A T C T G A C T A G C T G A G T A C C G T A A C G T A G T C A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A