Information for 8-CTGTMATTCCMSS (Motif 8)

A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
Reverse Opposite:
A T G C A T G C A C G T A C T G A C T G C G T A C G T A A C G T A C T G C T G A A G T C C G T A A T C G
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.868
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 16.4bp
Average Position of motif in Background55.5 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CTGTMATTCCMSS
TTGAATGAAATTCGA--
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTGTMATTCCMSS
NCTGTCAATCAN--
 A C G T A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTGTMATTCCMSS
---GCATTCCAGN
 A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTGTMATTCCMSS
---RCATTCCWGG
 A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CTGTMATTCCMSS
AAAGACCTGTCAATCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTGTMATTCCMSS
---RCATTCCWGG
 A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGTMATTCCMSS
GSCTGTCACTCA---
 A C G T A C G T A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CTGTMATTCCMSS
NNNCAGCTGTCAATATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTGTMATTCCMSS
AATTACCTGTCAATAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGTMATTCCMSS
SCTGTCAVTCAV--
 A C G T A T G C A C G T A C T G A G C T G T A C C G T A A C G T A C G T G T A C A G T C G T C A A T C G A T C G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T