Information for 6-TGCATTTACC (Motif 6)

A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C
Reverse Opposite:
C T A G C T A G A C G T G T C A C G T A G T C A A C G T C T A G A G T C C G T A
p-value:1e-10
log p-value:-2.393e+01
Information Content per bp:1.852
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif109.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets40.6 +/- 23.9bp
Average Position of motif in Background51.6 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGCATTTACC--
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCATTTACC
NNCAATTANN
 A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCATTTACC
ACTACAATTCCC
 A C G T A C G T A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCATTTACC
ANCGTTTANN
 A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCATTTACC
ATGMATATDC-
 A C G T A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCATTTACC
-GCACTTAA-
 A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCATTTACC--
-NNACTTACCTN
 A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C A C G T A C G T
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGCATTTACC---
---ATTTTCCATT
 A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGCATTTACC
TTCATTTGCATAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCATTTACC--
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A C G T A C G T A C G T T G C A A G T C A G T C A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T