p-value: | 1e-4 |
log p-value: | -1.100e+01 |
Information Content per bp: | 1.675 |
Number of Target Sequences with motif | 44.0 |
Percentage of Target Sequences with motif | 5.06% |
Number of Background Sequences with motif | 1201.9 |
Percentage of Background Sequences with motif | 2.52% |
Average Position of motif in Targets | 46.2 +/- 29.8bp |
Average Position of motif in Background | 51.0 +/- 28.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
TATA-Box(TBP)/Promoter/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTTAAAAGG GNCTATAAAAGG |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTTTAAAAGG TTTTATKRGG |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTAAAAGG NTTTTACGAGN |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTTAAAAGG--- NAATTTTACGAGNTNN |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTTAAAAGG--- ANATTTTACGAGNNNN |
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Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 6 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTTTAAAAGG- -TTTAATTGCN |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 7 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTTAAAAGG TTTTATTRGN |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTTTAAAAGG CGGTTTCAAA--- |
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LIN54/MA0619.1/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTAAAAGG NATTCAAAT-- |
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HOXD13/MA0909.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTAAAAGG NTTTTATTGG- |
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