Information for 11-TCAGAACTGACCC (Motif 16)

A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C
Reverse Opposite:
A C T G T A C G T C A G A G C T T A G C C G T A A T C G A G C T A G C T A G T C C A G T A T C G T C G A
p-value:1e-7
log p-value:-1.828e+01
Information Content per bp:1.657
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif107.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets38.5 +/- 23.0bp
Average Position of motif in Background47.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCAGAACTGACCC------
---NNNNTGACCCGGCGCG
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TCAGAACTGACCC
-------TGACCT
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCAGAACTGACCC------
---NNCNTGACCCCGCTCT
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TCAGAACTGACCC--
-------TGACCYCT
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAGAACTGACCC------
--TGTCGTGACCCCTTAAT
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCAGAACTGACCC------
--NNANTTGACCCCTNNNN
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCAGAACTGACCC------
--NNNNTTGACCCCTNNNN
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TCAGAACTGACCC--
-------TGACCTYA
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TCAGAACTGACCC----
-------TGACCTTGAT
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TCAGAACTGACCC---
------AAGACCCYYN
 A G C T T A G C G C T A T C A G T C G A T C G A A T G C C G A T A T C G T C G A A G T C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C