Information for 2-CCCWGGCCAGCTTGGA (Motif 4)

A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
Reverse Opposite:
A C G T T A G C A G T C G T C A C T G A A C T G A G T C C G A T C T A G A T C G A G T C A G T C G C T A C T A G A C T G T C A G
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.763
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 32.9bp
Average Position of motif in Background57.7 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CCCWGGCCAGCTTGGA
-------AAGCTTG--
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCCWGGCCAGCTTGGA
----NAACAGCTGG--
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCCWGGCCAGCTTGGA
------HCAGCTGDTN
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCCWGGCCAGCTTGGA
-----GACAGCTGCAG
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCWGGCCAGCTTGGA
---VNAVCAGCTGGC-
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCCWGGCCAGCTTGGA
-----AACAGCTGCAG
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCCWGGCCAGCTTGGA-
-----NVCAGCTGBBNN
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCCWGGCCAGCTTGGA---
----RGSMTBCTGGGAAAT
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCCWGGCCAGCTTGGA
-----ANCAGCTG---
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCCWGGCCAGCTTGGA
-----AACAGCTG---
 A G T C A G T C A G T C C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C A G C T A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T