Information for 6-AAGTCYTTGGSGA (Motif 2)

C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A
Reverse Opposite:
A C G T A G T C A T C G A G T C A G T C C G T A C G T A C T G A A T C G C G T A G T A C A C G T A C G T
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.3 +/- 26.8bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGTCYTTGGSGA--
-ANTCCCTNGGGAAT
 C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A A C G T A C G T
A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGTCYTTGGSGA
-NGTCCCNNGGGA
 C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A
A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:AAGTCYTTGGSGA
-------TGGGGA
 C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGTCYTTGGSGA
-TGACCTTGAN--
 C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AAGTCYTTGGSGA
------TTGGCA-
 C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAGTCYTTGGSGA
TTAAGTGCTT-----
 A C G T A C G T C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAGTCYTTGGSGA-
-----NTTGGCANN
 C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AAGTCYTTGGSGA
CTTTAAGTACTTAATG-
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAGTCYTTGGSGA--
---TGATTGGCTANN
 C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAGTCYTTGGSGA
-TGACCTTGAV--
 C G T A C G T A A C T G A C G T A T G C A G C T A C G T A C G T A C T G A C T G A T G C C T A G C G T A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T