Information for 4-AACCTTTGCT (Motif 5)

G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T
Reverse Opposite:
G T C A C T A G G A T C C G T A C G T A G T C A C A T G A T C G A G C T C A G T
p-value:1e-11
log p-value:-2.582e+01
Information Content per bp:1.696
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.60%
Number of Background Sequences with motif826.1
Percentage of Background Sequences with motif1.73%
Average Position of motif in Targets45.1 +/- 27.1bp
Average Position of motif in Background50.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AACCTTTGCT
--CCTTTGTT
 G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AACCTTTGCT--
--CCTTTGTTTT
 G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AACCTTTGCT-
TGACCTTTNCNT
 A C G T G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AACCTTTGCT--
--YCTTTGTTCC
 G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AACCTTTGCT
--CCWTTGTY
 G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0161.1_Rxra_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AACCTTTGCT-
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T A C G T G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AACCTTTGCT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AACCTTTGCT
AACCTTATAT
 G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AACCTTTGCT
CAAGCTT----
 A C G T G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACCTTTGCT-----
AATCCCTTTGATCTATC
 A C G T A C G T G T C A T C G A T A G C G T A C C A G T C G A T C G A T C T A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C