Information for 11-TAGCAGAKRG (Motif 16)

A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G
Reverse Opposite:
T G A C A G C T T G A C A G C T A G T C A C G T A T C G G T A C G C A T C T G A
p-value:1e-8
log p-value:-1.866e+01
Information Content per bp:1.791
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif58.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.7 +/- 25.2bp
Average Position of motif in Background52.7 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TAGCAGAKRG-
-AACAGATGGC
 A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G A C G T
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TAGCAGAKRG-
-AACAGATGGT
 A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G A C G T
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAGCAGAKRG--
--CCAGACRSVB
 A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TAGCAGAKRG
--CCAGACAG
 A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TAGCAGAKRG-
-AACAKATGGY
 A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G A C G T
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGCAGAKRG---
-AACAGATGGTCN
 A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G A C G T A C G T A C G T
A C G T C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGCAGAKRG
ATGCCAGACN-
 A C G T A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAGCAGAKRG
CACAGCAGGGGG
 A C G T A C G T A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGCAGAKRG-
VNAVCAGCTGGC
 A C G T A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G A C G T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAGCAGAKRG-----
AAGGCCAGATGGTCCGG
 A C G T A C G T A G C T C G T A A C T G A T G C C G T A A C T G C T G A A C T G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G