Information for 3-GAGAGAGARAAACACA (Motif 12)

A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C G T A C G T G A C T A C G T A G T C A C G T A G T C A C G T G T A C A C G T G T A C
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.860
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 26.3bp
Average Position of motif in Background63.3 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGAGARAAACACA---
AADGAGVCANYASTACAGNC
 A C G T A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGAGAGARAAACACA-
--CAAAAGTAAACAAAG
 A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A A C G T
A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAGAGAGARAAACACA
---ANAGATAAGAA--
 A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A
A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAGAGAGARAAACACA
-----AAATAAACA--
 A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGAGAGARAAACACA---
--GTTAAAAAAAAAAATTA
 A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGAGARAAACACA------
CACAAGGGARWARGRCACCATGAGG
 A C G T A C G T A C G T A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G C A G T A C C T G A C T G A T A C G C T A G C T A G C T G A T C A G C G A T T C G A C T G A C T A G T C A G A G T C C G T A A G T C G T A C C T G A C G A T A C T G C T G A C T A G A T C G

GATA2/MA0036.2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAGAGAGARAAACACA-
---NCAGATAAGAANNN
 A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAGAGAGARAAACACA
-----AGATAAGA---
 A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GAGAGAGARAAACACA-----
-----ATATCAAAACAAAACA
 A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GAGAGAGARAAACACA-----
----AACACCAAAACAAAGGA
 A C T G C G T A A C T G T C G A A C T G C G T A A C T G C G T A C T A G G T C A C G T A C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A