Information for 13-GVDGTCAGAGGTC (Motif 19)

A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C
Reverse Opposite:
A T C G C T G A A G T C A G T C A C G T A G T C A C G T A C T G C G T A A G T C G A T C A C G T A G T C
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 28.3bp
Average Position of motif in Background32.9 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GVDGTCAGAGGTC-
AGGGGTCAGAGGTCA
 A C G T A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GVDGTCAGAGGTC-
GAGGTCAAAGGTCA
 A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GVDGTCAGAGGTC-
GGGGTCAAAGGTCA
 A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GVDGTCAGAGGTC-
GGGGTCAAAGGTCA
 A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GVDGTCAGAGGTC-
GAGGTCAAAGGTCA
 A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GVDGTCAGAGGTC-
GGGGTCAAAGGTCA
 A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GVDGTCAGAGGTC---
AAAGGTCAAAGGTCAAC
 A C G T A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GVDGTCAGAGGTC-
TAGGGCAAAGGTCA
 A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GVDGTCAGAGGTC-
TGGGGCAAAGGTCA
 A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GVDGTCAGAGGTC-
GTAGGGCAAAGGTCA
 A C G T A C T G T C G A C T A G A C T G A C G T A G T C C G T A T C A G C G T A A C T G C T A G A G C T A T G C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A