Information for 7-TGTCTCCTCTMAGCAG (Motif 15)

A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G
Reverse Opposite:
G T A C A C G T C T A G G T A C A C G T C A T G C G T A T C A G C T G A A C T G A T C G C T G A A T C G C G T A G T A C G T C A
p-value:1e-10
log p-value:-2.423e+01
Information Content per bp:1.749
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.5 +/- 17.3bp
Average Position of motif in Background23.8 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTCTCCTCTMAGCAG
TGTTKCCTAGCAACM-
 A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGTCTCCTCTMAGCAG
TACGAGACTCCTCTAAC---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGTCTCCTCTMAGCAG
CTGTCTGG---------
 A C G T A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGTCTCCTCTMAGCAG----
-----CCACACAGCAGGAGA
 A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGTCTCCTCTMAGCAG
VBSYGTCTGG---------
 A C G T A C G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTCCTCTMAGCAG
NNNNTTGACCCCTNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGTCTCCTCTMAGCAG
CAGCTGTTTCCT--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTCCTCTMAGCAG---
TTATCTGNNNNCNNCAGCNG
 A C G T A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G A C G T A C G T A C G T
G A C T G C A T C T G A A C G T A G T C C G A T A T C G G A C T A T C G T A G C T A G C T A G C G T A C T A C G G T A C C G T A A T C G T A G C G A T C A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGTCTCCTCTMAGCAG----
-----CCACACAGCAGGAGA
 A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PKNOX2/MA0783.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGTCTCCTCTMAGCAG
TGACACCTGTCA----
 A C G T A C T G A C G T A T G C A G C T A T G C A G T C A G C T A G T C C G A T G T A C G T C A A C T G A G T C G T C A A C T G
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T A C G T A C G T