Information for 3-CACAGTGGAGCCC (Motif 5)

A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
Reverse Opposite:
A T C G C A T G C A T G G A T C A C G T A G T C A G T C G C T A A G T C A C G T A T C G C A G T A C T G
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.757
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif215.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets47.6 +/- 24.1bp
Average Position of motif in Background48.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CACAGTGGAGCCC
----GTGGAT---
 A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CACAGTGGAGCCC
CTCACACAATGGCGC--
 A C G T A C G T A C G T A C G T A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACAGTGGAGCCC-
TCCCAGMCRAGCCCC
 A C G T A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CACAGTGGAGCCC-
----GTGGGCCCCA
 A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C A C G T
A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CACAGTGGAGCCC
-ACAAAGGNBCCT
 A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACAGTGGAGCCC
GTCCCCAGGGGA----
 A C G T A C G T A C G T A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CACAGTGGAGCCC
-----CGGAGC--
 A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACAGTGGAGCCC
CACAGN-------
 A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CACAGTGGAGCCC
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CACAGTGGAGCCC
AACAAAGG-----
 A G T C G T C A A T G C C G T A T A C G C A G T A C T G T C A G T C G A C T A G G A T C G A T C T A G C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T