Information for 4-CAGAGKCACCCAAGGC (Motif 15)

T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C A G C T A C G T A T C G A C T G A T C G C G A T A C T G G T C A A G T C A G C T A T G C A C G T A T C G
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 21.6bp
Average Position of motif in Background71.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf423/MA0116.1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAGAGKCACCCAAGGC---
----GGCACCCAGGGGTGC
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGAGKCACCCAAGGC
---AGCCACTCAAG--
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CAGAGKCACCCAAGGC-
------CGCCTCAGGCA
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGAGKCACCCAAGGC-
----TGCCCTGAGGGCA
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CAGAGKCACCCAAGGC-
------AGCCTCAGGCA
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CAGAGKCACCCAAGGC-
-----TGCCCCCGGGCA
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAGAGKCACCCAAGGC-
----TGCCCTNAGGGCA
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAGAGKCACCCAAGGC-
----TGCCCNNAGGGCA
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAGAGKCACCCAAGGC
-SCAGYCADGCATGAC
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CAGAGKCACCCAAGGC-
------AGCCTCAGGCA
 T A G C C G T A A T C G C T G A T C A G A C G T A G T C C G T A A T G C A G T C T A G C C G T A T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A