Information for 14-GCCCCCATGACCC (Motif 17)

C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G A C T G A C G T A G T C C G T A A C G T T A C G C T A G A T C G A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.824
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.4 +/- 15.5bp
Average Position of motif in Background84.5 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCATGACCC--
TGACCCAGTGACCTAC
 A C G T C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.74
Offset:7
Orientation:reverse strand
Alignment:GCCCCCATGACCC
-------TGACCT
 C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GCCCCCATGACCC---
---CNNTTGACCTTTG
 C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

RXRA::VDR/MA0074.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCCATGACCC
TGAACCCGATGACCC
 A C G T A C G T C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.72
Offset:7
Orientation:reverse strand
Alignment:GCCCCCATGACCC--
-------TGACCYCT
 C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GCCCCCATGACCC--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCCATGACCC
AGGNCANNGTGACCT
 A C G T A C G T C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GCCCCCATGACCC------
--TGTCGTGACCCCTTAAT
 C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCCCCCATGACCC------
---NNNNTGACCCGGCGCG
 C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCCCCCATGACCC------
---NNCNTGACCCCGCTCT
 C T A G T G A C A G T C T A G C A G T C A G T C T G C A A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T