Information for 13-ATCCTGCAGG (Motif 13)

C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G
Reverse Opposite:
A T G C G A T C A C G T A C T G A T G C G T C A A C T G C A T G T G C A A G C T
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.838
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif268.5
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets41.0 +/- 28.0bp
Average Position of motif in Background53.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCCTGCAGG-----
DCHCAGCAGGRGGCC
 C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATCCTGCAGG---
-CACAGCAGGGGG
 C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATCCTGCAGG---
CCACACAGCAGGAGA
 A C G T A C G T C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCCTGCAGG---
CCACACAGCAGGAGA
 A C G T A C G T C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATCCTGCAGG
DCTCAGCAGG
 C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCCTGCAGG
ACATCCTGNT--
 A C G T A C G T C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATCCTGCAGG-----
---SDGCAGGTGCNS
 C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATCCTGCAGG---
GAGCACAGCAGGACA
 A C G T A C G T C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATCCTGCAGG----
----NNCAGGTGNN
 C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATCCTGCAGG---
----AACAGGTGT
 C T G A A C G T G T A C A G T C C A G T A T C G A G T C C G T A C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T