Information for 5-CAKTTGGCTGTGCTCT (Motif 4)

A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
Reverse Opposite:
C T G A A T C G C G T A C T A G A G T C G C T A A G T C C G T A A C T G G A T C A G T C C G T A G T C A G T A C A C G T A T C G
p-value:1e-13
log p-value:-3.054e+01
Information Content per bp:1.753
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.0 +/- 28.4bp
Average Position of motif in Background28.6 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0047.1_Myf6_1/Jaspar

Match Rank:1
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAKTTGGCTGTGCTCT
GAAGAACAGGTGTCCG------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAKTTGGCTGTGCTCT
----WDNCTGGGCA--
 A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAKTTGGCTGTGCTCT
---TWGTCTGV-----
 A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAKTTGGCTGTGCTCT
GTCATGTGACC-------
 A C G T A C G T A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAKTTGGCTGTGCTCT
AAGGCCAGATGGTCCGG----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAKTTGGCTGTGCTCT
VCAGCTGBNN-------
 A C G T A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAKTTGGCTGTGCTCT
VNAVCAGCTGGC--------
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAKTTGGCTGTGCTCT
NNCAGGTGNN--------
 A C G T A C G T A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAKTTGGCTGTGCTCT
AACAGATGGC--------
 A C G T A C G T A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAKTTGGCTGTGCTCT
NNVVCAGCTGBN--------
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G A C G T A C G T A C T G C T A G G T A C C G A T A C T G C G A T A C T G A G T C G C A T A T G C A G C T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T