Information for 5-GTCACTGGAGTGCCTG (Motif 21)

A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
Reverse Opposite:
A T G C G T C A A C T G A C T G A G T C G C T A A G T C G C A T A T G C T G A C G T C A T C A G C A G T T A C G T G C A A T G C
p-value:1e-7
log p-value:-1.679e+01
Information Content per bp:1.667
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 15.9bp
Average Position of motif in Background76.0 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTCACTGGAGTGCCTG
----CTTGAGTGGCT-
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTCACTGGAGTGCCTG
----CTYRAGTGSY--
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTCACTGGAGTGCCTG
-----TTGAGTGSTT-
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTCACTGGAGTGCCTG
----BTBRAGTGSN--
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTCACTGGAGTGCCTG
-----TTRAGTGSYK-
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GTCACTGGAGTGCCTG
-----TTAAGTGCTT-
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTCACTGGAGTGCCTG-
NNNANTGCAGTGCNNTT
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GTCACTGGAGTGCCTG-----
------GGNGCGNCTGTTNNN
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTCACTGGAGTGCCTG
----NTCAAGTGG---
 A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTCACTGGAGTGCCTG
AGTCACGC---------
 A C G T A T C G A C G T A T G C G T C A A G T C C A G T A C T G A T C G C G T A A C T G C G A T C T A G T G A C T A G C C A G T A T C G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T