Information for 2-SYCCAMWCTAGGA (Motif 2)

A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T C T G A A T C G C G A T A C T G A C G T A C T G A C T G C T A G A T C G
p-value:1e-12
log p-value:-2.966e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 23.5bp
Average Position of motif in Background63.5 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:SYCCAMWCTAGGA-------
----CTACTAGGATGTNNTN
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:SYCCAMWCTAGGA--
-NGCTTTCTAGGAAN
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A A C G T A C G T
A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SYCCAMWCTAGGA-
--CCATATATGGNA
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:SYCCAMWCTAGGA
ATCCAC-------
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:SYCCAMWCTAGGA-----
--TCTTTCGAGGAATTTG
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--SYCCAMWCTAGGA
GCGACCACACTG---
 A C G T A C G T A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:SYCCAMWCTAGGA--
TCCCAGMCRAGCCCC
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:SYCCAMWCTAGGA
-NSCACTYVAV--
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:SYCCAMWCTAGGA------
--NNGATCTAGAACCTNNN
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PB0078.1_Srf_1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:SYCCAMWCTAGGA-
TTCCATATATGGAA
 A T G C A G T C G T A C A G T C C G T A G T A C C G T A A T G C A G C T C G T A A C T G A C T G C G T A A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A