Information for 5-GGAAACTCCC (Motif 9)

C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
Reverse Opposite:
A C T G A C T G C T A G C T G A C A T G A C G T A C G T A G C T A G T C A G T C
p-value:1e-13
log p-value:-2.994e+01
Information Content per bp:1.838
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif6.06%
Number of Background Sequences with motif737.2
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets49.3 +/- 29.1bp
Average Position of motif in Background48.9 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GGAAACTCCC
GGAAATTCCC
 C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGAAACTCCC
GGAAATCCCC
 C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GGAAACTCCC
GGAAATTCCC
 C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGAAACTCCC
GGAAANCCCC
 C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GGAAACTCCC-
GGGAAATCCCCN
 A C G T C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTCCC
NNTGGAAANN---
 A C G T A C G T A C G T C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTCCC
AATGGAAAAT---
 A C G T A C G T A C G T C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTCCC
AATGGAAAAT---
 A C G T A C G T A C G T C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGAAACTCCC
GGGGGAATCCCC
 A C G T A C G T C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTCCC
NATGGAAAAN---
 A C G T A C G T A C G T C T A G A C T G C T G A C G T A C G T A G T A C A G C T A G T C G T A C A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T