Information for 5-GWAAYATYTARGCCAT (Motif 7)

A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T
Reverse Opposite:
C T G A C G A T A C T G A T C G G T A C G A C T A C G T C G T A C T A G G T C A A C G T C T G A A C G T A G C T C G A T G T A C
p-value:1e-13
log p-value:-3.212e+01
Information Content per bp:1.742
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.4 +/- 14.8bp
Average Position of motif in Background61.2 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GWAAYATYTARGCCAT
-------CTAGGCCT-
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GWAAYATYTARGCCAT
-------CNAGGCCT-
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GWAAYATYTARGCCAT---
--GATAATTAATCCCTCTT
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GWAAYATYTARGCCAT-
--AAGTTCAAGGTCAGC
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T A C G T
A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GWAAYATYTARGCCAT
-AAAGATCAAAGGGTT
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.53
Offset:10
Orientation:forward strand
Alignment:GWAAYATYTARGCCAT----
----------GGCCATTAAC
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GWAAYATYTARGCCAT
-AAAGATCAAAGG---
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GWAAYATYTARGCCAT---
--AATCGTTAATCCCTTTA
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GWAAYATYTARGCCAT
-AAAGATCAAAGGAA-
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GWAAYATYTARGCCAT
-----AAYTAGGTCA-
 A C T G C G T A C T G A G T C A A G C T G T C A A C G T A G T C G C A T C G T A C T G A A C T G A T G C A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T