Information for 14-TATGCTCATG (Motif 39)

C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C G T C A A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.926
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif49.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets38.5 +/- 23.1bp
Average Position of motif in Background48.8 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TATGCTCATG
TATGCAAAT-
 C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TATGCTCATG--
WATGCAAATGAG
 C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TATGCTCATG--
TATGCWAATBAV
 C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU3F2/MA0787.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TATGCTCATG-
TTATGCAAATTA
 A C G T C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TATGCTCATG-
TTATGCAAATTA
 A C G T C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TATGCTCATG
TATGCAAAT-
 C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TATGCTCATG---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TATGCTCATG---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TATGCTCATG
AATATGCAAATT
 A C G T A C G T C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TATGCTCATG---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T C G A T C G T A A C G T C T A G A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A