Information for 22-CAAAGGGCAGGTG (Motif 34)

A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C G T A C A C G T A C T G A G T C G T A C A G T C C G A T A C G T A C G T A C T G
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 27.9bp
Average Position of motif in Background35.2 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CAAAGGGCAGGTG
CAAAGGTCAG---
 A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:CAAAGGGCAGGTG---
----SDGCAGGTGCNS
 A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CAAAGGGCAGGTG--
-----NNCAGGTGNN
 A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CAAAGGGCAGGTG--
-----GACAGGTGTN
 A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CAAAGGGCAGGTG-
-----AACAGGTGT
 A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CAAAGGGCAGGTG--
-----NNCAGGTGCG
 A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CAAAGGGCAGGTG--
-----NNCAGGTGTN
 A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CAAAGGGCAGGTG
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAAAGGGCAGGTG
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAAAGGGCAGGTG-----
-NNNNAGCAGCTGCTGAN
 A G T C C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G