Information for 20-MTMRAWYGTGCCT (Motif 32)

G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T
Reverse Opposite:
C G T A A C T G A T C G T A G C C G T A G T A C C T G A C G T A A C G T A G C T A C G T C G T A A C T G
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.856
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.4 +/- 25.7bp
Average Position of motif in Background29.4 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-MTMRAWYGTGCCT---
AATCAATTGTTCCGCTA
 A C G T G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:MTMRAWYGTGCCT-
---NNACTTGCCTT
 G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:MTMRAWYGTGCCT
---RTACGTGC--
 G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:MTMRAWYGTGCCT--
-----CTGTTCCTGG
 G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:MTMRAWYGTGCCT---
-------ATGCCCACC
 G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:MTMRAWYGTGCCT
---GGACGTGC--
 G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:MTMRAWYGTGCCT
-CGGCACGTGCCA
 G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T
A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-MTMRAWYGTGCCT--
NNNNTTGTGTGCTTNN
 A C G T G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-MTMRAWYGTGCCT--
AANTTATTGTTCTNNA
 A C G T G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:MTMRAWYGTGCCT
-TGGCACGTGCCA
 G T A C A C G T G T C A C T G A C G T A C G A T A G C T A C T G A C G T A C T G A T G C A G T C A C G T
A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A