Information for 8-CTGTCAGGCT (Motif 16)

G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
Reverse Opposite:
G T C A A T C G G T A C T A G C A C G T T C A G C T G A A T G C C G T A C A T G
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.836
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif160.6
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets47.2 +/- 26.6bp
Average Position of motif in Background51.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAGGCT
VBTGWCAGCB-
 A C G T G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTGTCAGGCT
NTGTCAN---
 G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAGGCT
GCTGTCAA---
 A C G T G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAGGCT
CCTGTCAA---
 A C G T G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTGTCAGGCT
YTGWCADY--
 G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------CTGTCAGGCT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTGTCAGGCT
-TGTCANYT-
 G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAGGCT
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGTCAGGCT-
NCTGTCAATCAN
 A C G T G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTGTCAGGCT
GSCTGTCACTCA
 A C G T A C G T G A T C A C G T A T C G A G C T A G T C C G T A A T C G A C T G A T G C A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A