Information for 9-AAGTGCAHAAAACCTC (Motif 8)

C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
Reverse Opposite:
C T A G C G T A A C T G A C T G A G C T A G C T A C G T C G A T C T G A A C G T A C T G A G T C C G T A A G T C A C G T A G C T
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.832
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 22.6bp
Average Position of motif in Background58.2 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGTGCAHAAAACCTC
CAATTGCAAAAATAT--
 A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGTGCAHAAAACCTC
TTRAGTGSYK--------
 A C G T A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCAHAAAACCTC
NTCAAGTGG----------
 A C G T A C G T A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCAHAAAACCTC
TTGAGTGSTT--------
 A C G T A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAGTGCAHAAAACCTC
TACATGTGCACATAAAA--
 A C G T A C G T A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCAHAAAACCTC
TTAAGTGC----------
 A C G T A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AAGTGCAHAAAACCTC
NNGTATGTGCACATNNN---
 A C G T A C G T A C G T A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCAHAAAACCTC
NTCAAGTGGN---------
 A C G T A C G T A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGTGCAHAAAACCTC
-ATTGCACAATA----
 C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAGTGCAHAAAACCTC
BTBRAGTGSN---------
 A C G T A C G T A C G T C T G A C G T A A C T G C G A T A C T G G T A C C G T A G A C T C G T A C G T A C T G A C T G A A G T C G T A C A C G T A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T