Information for 18-TCTAAATTTA (Motif 25)

A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A C G T A A C G T C A G T A C G T C G T A A T C G T G C A
p-value:1e-6
log p-value:-1.583e+01
Information Content per bp:1.854
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif85.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets42.0 +/- 21.7bp
Average Position of motif in Background48.7 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TCTAAATTTA----
GGACTGAATTCATGCC
 A C G T A C G T A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCTAAATTTA--
TCTATTTTTAGA
 A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTAAATTTA--
GCTATTTTTAGC
 A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTAAATTTA--
KCTATTTTTRGH
 A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTAAATTTA--
TCTATTTATAGN
 A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTAAATTTA----
TTCTATTTTTAGNNN
 A C G T A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCTAAATTTA--
GCTATTTATAGC
 A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTAAATTTA--
GCTATTTTTGGM
 A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCTAAATTTA-----
---DGWTTTATGRCN
 A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCTAAATTTA---
TATCATAATTAAGGA
 A C G T A C G T A C G T T A G C A C G T C G T A G T C A G T C A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A