Information for 19-AAGTACGTGACCT (Motif 23)

C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A G T C C G T A A T G C A C T G A C G T C T G A A G T C C G A T A C G T
p-value:1e-7
log p-value:-1.715e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 30.4bp
Average Position of motif in Background52.6 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:AAGTACGTGACCT-
------GTGACCTT
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:AAGTACGTGACCT--
-------TGACCTYA
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:AAGTACGTGACCT
-------TGACCT
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAGTACGTGACCT------
---NNNGTGACCTTTGNNN
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGTACGTGACCT
-GCCACGTGACC-
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:AAGTACGTGACCT----
-------TGACCTTGAT
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.66
Offset:6
Orientation:forward strand
Alignment:AAGTACGTGACCT---
------NTGACCTTGA
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AAGTACGTGACCT
--NCACGTGACN-
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:AAGTACGTGACCT--
-------TGACCYCT
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAGTACGTGACCT------
---NNNNTGACCTTTNNNN
 C G T A C G T A A C T G A G C T C G T A G T A C A T C G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A