Information for 14-ACGCTGTTTGGGG (Motif 19)

C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G
Reverse Opposite:
A T G C A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G A T G C A C T G A G C T
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 17.7bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACGCTGTTTGGGG--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACGCTGTTTGGGG-----
---CTGATTGGTCNATTT
 C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACGCTGTTTGGGG---
----TGTCAGGGGGCG
 C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACGCTGTTTGGGG-
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACGCTGTTTGGGG
---TTGATTGN--
 C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACGCTGTTTGGGG-
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACGCTGTTTGGGG-
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACGCTGTTTGGGG---
NNCTTTGTTTTGNTNNN
 A C G T C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACGCTGTTTGGGG--
NNNNGTTGATTGGGTCG
 A C G T A C G T C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACGCTGTTTGGGG
---CTGTCTGG--
 C T G A A G T C A T C G A G T C A C G T A C T G C G A T A C G T A C G T A C T G A C T G A C T G A T C G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T