Information for 13-GGAGTTKTRGTCAGRK (Motif 17)

A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
Reverse Opposite:
G T A C A G T C A G T C A C G T A C T G G C T A A G T C A G T C C G T A G T A C C G T A C G T A A G T C A C G T A G T C A G T C
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.2 +/- 16.0bp
Average Position of motif in Background32.5 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTTKTRGTCAGRK
GGGAATTGTAGT-----
 A C G T A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------GGAGTTKTRGTCAGRK
GCMTBCTGGGAGTTGTAGTY----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------GGAGTTKTRGTCAGRK
GCATTCTGGGAATTGTAGTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTTKTRGTCAGRK
NNNTGTTGTTGTTNG--
 A C G T A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGAGTTKTRGTCAGRK
--NNHTGTGGTTWN--
 A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGAGTTKTRGTCAGRK
---GCTGTGGTTT---
 A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGAGTTKTRGTCAGRK
----CTGTGGTTTN--
 A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GGAGTTKTRGTCAGRK
-GTNTTGTTGTGANNT
 A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:GGAGTTKTRGTCAGRK
---NNTGTGGTTT---
 A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GGAGTTKTRGTCAGRK
GCGGAGGTGTCGCCTC--
 A C G T A C G T A C T G C T A G C G T A A C T G A C G T A C G T A C T G A C G T C T A G A C T G C G A T A G T C C G T A A C T G C T A G C A G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T A C G T