Information for 6-GSKKBYTTYM (Motif 9)

A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C
Reverse Opposite:
A C T G T C G A C G T A C T G A C T A G T A C G T G C A T G A C T A G C G T A C
p-value:1e-9
log p-value:-2.204e+01
Information Content per bp:1.504
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif13.96%
Number of Background Sequences with motif3630.1
Percentage of Background Sequences with motif7.58%
Average Position of motif in Targets48.2 +/- 26.8bp
Average Position of motif in Background50.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GSKKBYTTYM
GGGGATTTCC
 A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GSKKBYTTYM
GGGGATTTCC
 A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GSKKBYTTYM
NRRGGGTCTT---
 A C G T A C G T A C G T A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GSKKBYTTYM-
NGGGGATTTCCC
 A C G T A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GSKKBYTTYM
GGGAATTTCC
 A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GSKKBYTTYM--
GGGGATTCCCCC
 A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

GATA2/MA0036.2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GSKKBYTTYM---
AGATTCTTATCTGT
 A C G T A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C A C G T A C G T A C G T
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GSKKBYTTYM-
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GSKKBYTTYM
CNGTCCTCCC
 A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GSKKBYTTYM
GGGAATTTCC
 A C T G A T C G A C T G A C G T A T G C G A T C G A C T G C A T A G C T T G A C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C