Information for 6-GGGAAGGCGCTGTTGT (Motif 6)

T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T
Reverse Opposite:
G T C A A G T C G C T A C T G A A G T C C G T A A C T G G T A C A C T G G T A C A G T C A C G T C G A T A G T C A G T C A T G C
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.740
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets33.9 +/- 20.3bp
Average Position of motif in Background43.4 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:8
Orientation:forward strand
Alignment:GGGAAGGCGCTGTTGT--
--------GCTGTGGTTT
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:GGGAAGGCGCTGTTGT---
---------CTGTGGTTTN
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GGGAAGGCGCTGTTGT---
-------NNHTGTGGTTWN
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGGAAGGCGCTGTTGT
----GGGAATTGTAGT
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GGGAAGGCGCTGTTGT--
-------GTCTGTGGTTT
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GGGAAGGCGCTGTTGT
--------GCTGTG--
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GGGAAGGCGCTGTTGT--
--------NNTGTGGTTT
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGGAAGGCGCTGTTGT-----
------GTNTTGTTGTGANNT
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGAAGGCGCTGTTGT----
---AAGACGCTGTAAAGCGA
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGAAGGCGCTGTTGT----
---AAGACGCTGTAAAGCGA
 T A C G C T A G C T A G C G T A T C G A A C T G C A T G T A G C C A T G A G T C A C G T A C T G A G C T C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A