Information for 13-CACAAAATAA (Motif 14)

A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.119e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.8 +/- 29.2bp
Average Position of motif in Background49.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAATAA-
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACAAAATAA--
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACAAAATAA-
DCYAAAAATAGM
 A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACAAAATAA
CCAAAAATAG
 A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACAAAATAA--
AAGATAAGATAACA
 A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACAAAATAA--
TACTGGAAAAAAAA
 A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACAAAATAA----
ATATCAAAACAAAACA
 A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACAAAATAA-
KCCAAAAATAGC
 A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAATAA-
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACAAAATAA-
GCTAAAAATAGC
 A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C