Information for 16-TCAAGAGCAACAAKAT (Motif 28)

G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T
Reverse Opposite:
G C T A A C G T G T A C A C G T A C G T A T C G A G C T A C G T A T C G T A G C A C G T A G T C A C G T A G C T T A C G C G T A
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.749
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 20.6bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0011.1_HMG_class/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:TCAAGAGCAACAAKAT
--------AACAAT--
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCAAGAGCAACAAKAT---
--NNNNNGAACAATTGANN
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAAGAGCAACAAKAT
-AACAAACAACAAGAG
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TCAAGAGCAACAAKAT
-------NAACAAT--
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAAGAGCAACAAKAT---
--TCACGGAACAATAGGTG
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAAGAGCAACAAKAT-------
-AATAAAGAACAATAGAATTTCA
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCAAGAGCAACAAKAT---
---TTAAGAACAATAAATT
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCAAGAGCAACAAKAT----
---TAGTGAACAATAGATTT
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCAAGAGCAACAAKAT---
---TTTAGAACAATAAAAT
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCAAGAGCAACAAKAT----
----AATGAACAATGGAATT
 G A C T A T G C C T G A G T C A A C T G C G T A A C T G T A G C C G T A C T G A T A G C C G T A C G T A A C T G C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T