Information for 11-TATTCACACAAAA (Motif 17)

A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A
Reverse Opposite:
C G A T A G C T C G A T A C G T A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T G T C A
p-value:1e-9
log p-value:-2.303e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 30.4bp
Average Position of motif in Background22.9 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TATTCACACAAAA
GACCACATTCATACAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATTCACACAAAA-
ATTTGCATACAATGG
 A C G T A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TATTCACACAAAA--
CGAAGCACACAAAATA
 A C G T A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATTCACACAAAA--
ATATCAAAACAAAACA
 A C G T A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TATTCACACAAAA----
--CTCACACAATGGCGC
 A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TATTCACACAAAA
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TATTCACACAAAA
ATATTTACATA---
 A C G T A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TATTCACACAAAA
NTTTTCACACCTT-
 A C G T A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TATTCACACAAAA
-TTTCACACCT--
 A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TATTCACACAAAA
--TTCACACCTT-
 A C G T C G T A A C G T C G A T A G T C C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T