Information for 7-AGAGAVADACTAAAAA (Motif 10)

C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A
Reverse Opposite:
C G A T A C G T A C G T A G C T A C G T C G T A C T A G A C G T G A T C A C G T A G T C A G C T A G T C A C G T A T G C A C G T
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.798
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.1 +/- 21.6bp
Average Position of motif in Background48.3 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGAGAVADACTAAAAA--
----AAATAAGAAAAAAC
 C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGAGAVADACTAAAAA--
--TGCCAAAATAAACANN
 C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A A C G T A C G T
A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGAGAVADACTAAAAA
------AAAGTAAACA
 C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AGAGAVADACTAAAAA---
-----AAGATAAGATAACA
 C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGAGAVADACTAAAAA
------AAAGTAAACA
 C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------AGAGAVADACTAAAAA
AAANNGAAAGTGAAAGTAAAN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A A C G T

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGAGAVADACTAAAAA
GGAAAGCGAAACCAAAAC
 A C G T A C G T C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGAGAVADACTAAAAA---
----CAAAAGTAAACAAAG
 C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGAGAVADACTAAAAA
----ANAGATAAGAA-
 C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A
A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGAGAVADACTAAAAA--
WNAGTCADAVTGAAACTN
 C G T A A T C G C G T A A C T G C T G A T A C G C G T A C A T G C G T A A G T C C G A T C G T A C T G A C G T A G T C A C G T A A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G