Information for 1-GBTGCCACCWGVKGGC (Motif 2)

T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C
Reverse Opposite:
C T A G A G T C A T G C G T C A A G C T G A T C C G A T C T A G T C A G A G C T C A T G C T A G A G T C T C G A T A C G A G T C
p-value:1e-26
log p-value:-6.100e+01
Information Content per bp:1.639
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif185.0
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets52.6 +/- 27.2bp
Average Position of motif in Background49.3 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----GBTGCCACCWGVKGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GBTGCCACCWGVKGGC-----
-TGGCCACCAGGTGGCACTNT
 T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GBTGCCACCWGVKGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GBTGCCACCWGVKGGC
------AACAGATGGC
 T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GBTGCCACCWGVKGGC-
--GGCCYCCTGCTGDGH
 T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GBTGCCACCWGVKGGC--
----TCACCTCTGGGCAG
 T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GBTGCCACCWGVKGGC
---NNCACCTGNN---
 T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C
A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GBTGCCACCWGVKGGC--
----CCGCCCAAGGGCAG
 T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GBTGCCACCWGVKGGC-
---CCCCCCCGGGGGNN
 T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GBTGCCACCWGVKGGC
----VNAVCAGCTGGC
 T C A G A T C G A G C T T C A G G A T C G T A C C T G A A G T C G A T C G C T A C T A G T C G A C A G T A T C G T C A G G A T C
A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C